feat(v2): add permission mode passthrough and fix agent stop-on-close

- Add permission_mode field to AgentQueryOptions (Rust, sidecar, bridge)
  flowing from controller through sidecar to SDK; defaults to
  bypassPermissions, supports default mode
- Fix AgentPane onDestroy bug: remove stopAgent() from onDestroy (fires
  on layout remounts), move stop-on-close to TilingGrid onClose handler
- Bundle SDK into sidecar via esbuild (remove --external flag)

v2/src/lib/adapters/agent-bridge.ts

@@ -11,6 +11,7 @@ export interface AgentQueryOptions {
   max_turns?: number;
   max_budget_usd?: number;
   resume_session_id?: string;
+  permission_mode?: string;
   remote_machine_id?: string;
 }
 

v2/src/lib/components/Agent/AgentPane.svelte

@@ -1,5 +1,5 @@
 <script lang="ts">
-  import { onMount, onDestroy } from 'svelte';
+  import { onMount } from 'svelte';
   import { marked, Renderer } from 'marked';
   import { queryAgent, stopAgent, isAgentReady, restartAgent } from '../../adapters/agent-bridge';
   import {
@@ -68,11 +68,8 @@
     }
   });
 
-  onDestroy(() => {
-    if (session?.status === 'running' || session?.status === 'starting') {
-      stopAgent(sessionId).catch(() => {});
-    }
-  });
+  // NOTE: Do NOT stop agents in onDestroy — it fires on layout changes/remounts,
+  // not just explicit close. Stop-on-close is handled by TilingGrid.
 
   let followUpPrompt = $state('');
 

v2/src/lib/components/Layout/TilingGrid.svelte

@@ -14,6 +14,8 @@
   } from '../../stores/layout.svelte';
   import { detachPane } from '../../utils/detach';
   import { isDetachedMode } from '../../utils/detach';
+  import { stopAgent } from '../../adapters/agent-bridge';
+  import { getAgentSession } from '../../stores/agents.svelte';
 
   let gridTemplate = $derived(getGridTemplate());
   let panes = $derived(getPanes());
@@ -162,7 +164,15 @@
         <PaneContainer
           title={pane.title}
           status={pane.focused ? 'running' : 'idle'}
-          onClose={() => removePane(pane.id)}
+          onClose={() => {
+            if (pane.type === 'agent') {
+              const s = getAgentSession(pane.id);
+              if (s?.status === 'running' || s?.status === 'starting') {
+                stopAgent(pane.id).catch(() => {});
+              }
+            }
+            removePane(pane.id);
+          }}
           onDetach={detached ? undefined : () => handleDetach(pane)}
         >
           {#if pane.type === 'terminal'}